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Protein Overview: RAV2_ARATH

General Information:
Name(s) found: RAV2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75340021|sp|P82280.1|RAV2_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription repressor RAV2; AltName: Full=Ethylene-responsive transcription factor RAV2; AltName: Full=Protein RELATED TO ABI3/VP1 2; AltName: Full=Protein RELATED TO APET [NCBI NR]
  • gi|3868859|dbj|BAA34251.1| RAV2 [Arabidopsis thaliana] [NCBI NR]
  • gi|18409138|ref|NP_564947.1| RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor/ transcription repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|15810645|gb|AAL07247.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana] [NCBI NR]
  • gi|13430800|gb|AAK26022.1|AF360312_1 putative DNA-binding protein(RAV2 [Arabidopsis thaliana] [NCBI NR]
  • gi|12324134|gb|AAG52035.1|AC011914_5 RAV2; 17047-15989 [Arabidopsis thaliana] [NCBI NR]
  • gi|12323214|gb|AAG51586.1|AC011665_7 putative DNA-binding protein (RAV2-like) [Arabidopsis thaliana] [NCBI NR]
  • pir||T51330 DNA binding protein RAV2 [imported] - Arabidopsis thaliana [NCBI NR]
  • AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1 [Swiss-Prot]
  • Ethylene-responsive transcription factor RAP2-8 OS=Arabidopsis thaliana GN=RAP2-8 PE=2 SV=1 [Swiss-Prot]
  • (P82280) RAV2 protein [athaliana3702.FASTAC.txt]
  • putative DNA-binding protein RAV2 [Arabidopsis thaliana]gi|13430800|gb|AAK26022.1| putative DNA-binding protein(RAV2 [Arabidopsis thaliana]gi|3868859|dbj|BAA34251.1| RAV2 [Arabidopsis thaliana]gi|11357264|pir||T51330 DNA binding protein RAV2 [imported] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNA-binding protein RAV2 (RAV2) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RAP2.8, RAV2 | RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor | chr1:25884105-25885163 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative DNA-binding protein (RAV2-like) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative DNA-binding protein RAV2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative DNA-binding protein(RAV2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RAV2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RAV2; 17047-15989 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RAV2; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD LENGTH=352 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD LENGTH=352 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL  60
   61 PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR SYDIAACRFR GRDAVVNFKN 120
  121 VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV 180
  181 LKTREVLFEK AVTPSDVGKL NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR 240
  241 FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV 300
  301 QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] PSI-BLAST 11.69897 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    2 View Details [178..291] PSI-BLAST 22.09691 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [292..352] MSA 1.105991 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle