YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ERF80_ARATH

General Information:
Name(s) found: ERF80_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 200 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: regulation of transcription, DNA-dependent [TAS]
    ethylene mediated signaling pathway [TAS]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS][TAS]
    transcription repressor activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG  60
   61 TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG GENDSYVNRT TVTTAREMTR 120
  121 QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK 180
  181 VEPRRELNLD LNLAPPVVDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 20.522879 GCC-box binding domain
    2 View Details [93..200] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle