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Protein Overview: DMR6_ARATH

General Information:
Name(s) found: DMR6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|20148253|gb|AAM10017.1| flavanone 3-hydroxylase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238567|ref|NP_197841.1| DMR6 (DOWNY MILDEW RESISTANT 6); oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both [NCBI NR]
  • gi|14423476|gb|AAK62420.1|AF386975_1 flavanone 3-hydroxylase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177853|dbj|BAB11205.1| flavanone 3-hydroxylase-like protein [Arabidopsis thaliana] [NCBI NR]
  • Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana GN=DMR6 PE=1 SV=1 [Swiss-Prot]
  • (Q9FLV0) Flavanone 3-hydroxylase-like protein [athaliana3702.FASTAC.txt]
  • flavanone 3-hydroxylase-like protein [Arabidopsis thaliana]gi|20148253|gb|AAM10017.1| flavanone 3-hydroxylase-like protein [Arabidopsis thaliana]gi|14423476|gb|AAK62420.1| flavanone 3-hydroxylase-like protein [Arabidopsis thaliana]gi|15238567|ref|NP_19 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:8378967-8383157 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • flavanone 3-hydroxylase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DMR6 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:8378964-8383154 FORWARD LENGTH=341 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Downy mildew resistance 6 protein / oxidoreductase OS=Arabidopsis thaliana GN=DMR6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to bacterium [IGI]
    response to fungus [IEP][IGI]
    flavonoid biosynthetic process [ISS]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA  60
   61 RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS DDPTKTTRLS TSFNVKKEEV 120
  121 NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY 180
  181 MKKVLGEQGQ HMAVNYYPPC PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA 240
  241 VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL 300
  301 WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 86.69897 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle