YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ERF39_ARATH

General Information:
Name(s) found: ERF39_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|75337675|sp|Q9SUK8.1|ERF39_ARATH RecName: Full=Ethylene-responsive transcription factor ERF039 [NCBI NR]
  • gi|7268425|emb|CAB78717.1| apetala2 domain TINY like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|58652080|gb|AAW80865.1| At4g16750 [Arabidopsis thaliana] [NCBI NR]
  • gi|5302798|emb|CAB46040.1| apetala2 domain TINY like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|48479340|gb|AAT44941.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|44021914|gb|AAS46629.1| At4g16750 [Arabidopsis thaliana] [NCBI NR]
  • pir||F85186 apetala2 domain TINY like protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15235858|ref|NP_193408.1| DRE-binding transcription factor, putative [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1 [Swiss-Prot]
  • (Q9SUK8) APETALA2 domain TINY like protein [athaliana3702.FASTAC.txt]
  • apetala2 domain TINY like protein [Arabidopsis thaliana]gi|5302798|emb|CAB46040.1| apetala2 domain TINY like protein [Arabidopsis thaliana]gi|48479340|gb|AAT44941.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana]gi|44021914|gb|AAS46629. [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DRE-binding transcription factor, putative | chr4:9421143-9421682 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g16750 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • apetala2 domain TINY like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Integrase-type DNA-binding superfamily protein | chr4:9421121-9421660 REVERSE LENGTH=179 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 179 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: multicellular organismal development [ISS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDSSSHESQ RNLRSPVPEK TGKSSKTKNE QKGVSKQPNF RGVRMRQWGK WVSEIREPRK  60
   61 KSRIWLGTFS TPEMAARAHD VAALAIKGGS AHLNFPELAY HLPRPASADP KDIQEAAAAA 120
  121 AAVDWKAPES PSSTVTSSPV ADDAFSDLPD LLLDVNDHNK NDGFWDSFPY EDPFFLENY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] PSI-BLAST 21.69897 GCC-box binding domain
    2 View Details [100..179] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle