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Protein Overview: gi|25285682, gi|...

General Information:
Name(s) found: gi|25285682 [NCBI NR]
gi|15219523 [NCBI NR]
gi|124301056 [NCBI NR]
gi|12320957 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • pir||G86472 probable hyoscyamine 6-dioxygenase hydroxylase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219523|ref|NP_174753.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|124301056|gb|ABN04780.1| At1g35190 [Arabidopsis thaliana] [NCBI NR]
  • gi|12320957|gb|AAG50602.1|AC079605_7 hyoscyamine 6-dioxygenase hydroxylase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 329 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: alkaloid biosynthetic process [ISS]
    Molecular Function: iron ion binding [IEA]
    oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENHTTMKVS SLNCIDLAND DLNHSVVSLK QACLDCGFFY VINHGISEEF MDDVFEQSKK  60
   61 LFALPLEEKM KVLRNEKHRG YTPVLDELLD PKNQINGDHK EGYYIGIEVP KDDPHWDKPF 120
  121 YGPNPWPDAD VLPGWRETME KYHQEALRVS MAIARLLALA LDLDVGYFDR TEMLGKPIAT 180
  181 MRLLRYQGIS DPSKGIYACG AHSDFGMMTL LATDGVMGLQ ICKDKNAMPQ KWEYVPPIKG 240
  241 AFIVNLGDML ERWSNGFFKS TLHRVLGNGQ ERYSIPFFVE PNHDCLVECL PTCKSESELP 300
  301 KYPPIKCSTY LTQRYEETHA NLSIYHQQT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..329] PSI-BLAST 76.154902 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  2.13037944896112 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.96457406152694 bayes_pls_golite062009
  • binding
    		•  1.78258647804494 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.778311364997835 bayes_pls_golite062009
  • DNA binding
    		•  0.705906158188305 bayes_pls_golite062009
  • protein binding
    		•  0.200706152890822 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle