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Protein Overview: gi|15239997, gi|...

General Information:
Name(s) found: gi|9758411 [NCBI NR]
gi|15239997 [NCBI NR]
Description(s) found:
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  • gi|9758411|dbj|BAB08953.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • ref|NP_196249.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FNH7) Gb|AAD29059.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15239997|ref|NP_196249.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Gb|AAD29059.1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEERRDDYK FLRIQDAFKA LHLHVNLIGV IVELGFSNGS DCSCTLKIVD PWYSGSGLPV  60
   61 KFVARTIRDL PRVESIGDII LLSRVKIVLI NRKITALCNE TTSSSFALFN GKHSVDSIPY 120
  121 QSSPKFLMRE QDKNFLSNLR EWMITYKFED GSCCFTSLKD IKEGECSNLS CQIVHISKVY 180
  181 KDRWYLFVWD GTEMPPCNIL VKSERLPLCV EPEMLPTYML RKFPTFGSVL RIIVDRVSEK 240
  241 QAIHCLQPGQ HVKLLNLFFQ VNMGLWNATF TPSTKMQYTM SREMEAFSPQ RFLLTPFLIL 300
  301 MCGEKFSPRW NPIARCISRS HSEITGVAHD DAPFVSLMDI LTYHNVTAKF RCVVRFIQVY 360
  361 PRDVRKLRDI NGNIKLVAIL EDATARIHAS LYADEGEKFF GCDESDEEAL VKKLNRLLGG 420
  421 EEMEKVPRNP PWVQCCLFSF YKHKMDQWES RRFRIFDTWI NAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..463] PSI-BLAST 78.39794 Telomere end binding protein alpha subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.141433535514844 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle