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Protein Overview: gi|15217867, gi|...

General Information:
Name(s) found: gi|4646199 [NCBI NR]
gi|25404534 [NCBI NR]
gi|22136990 [NCBI NR]
gi|17381230 [NCBI NR]
gi|15217867 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|4646199|gb|AAD26872.1|AC007230_6 EST gb|T22166 comes from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||G96675 hypothetical protein T23K8.9 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22136990|gb|AAM91724.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17381230|gb|AAL36427.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15217867|ref|NP_176697.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 653 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEMVRLPI HEHWLTPARD NRWGKCCGLQ FKTISDGYNC RKCRYFFHKS CSNCPKEINH  60
   61 PSHKCDKNLS LITNFASWSV RCRTCKETIQ PYIQNYECQR CEFNIHLDCF KYPPPKVIDF 120
  121 PQNHDHKLKL EMVRSSFTCF TCGKGGSGYP YKCHECDLAF HVDCEKYGAE VNHPSHSLHT 180
  181 LKLITGKPPA YTDGNCSLCG KKIFDEMFYH CSACNFTLDL RCVSLPPPLN LHDQNTHNHE 240
  241 LTLMPKLISF TCTTCGLHGD RSPYVCLQCN FTSHNNCSGF PWVININRHD HRVSRTSLLG 300
  301 IIDSVCGVCR KKMDWSCGGY SCKRCSESTF HTKCATREDV WDGIEMKDEP EEDEPMEPFE 360
  361 VISEGIIRHF SHIEHNLRLD KSGTFVEERS CKACAYPIYH DPFYSCMSCD FLLHENCAKH 420
  421 PTRKRHVLSN KPYILHASQR NYSKCKACGV FFNCFIYGTF PFGLDVRCAS FSGSLVHPSH 480
  481 QHPLFYTSPK GVCSACNKET SHVLRCVEDK CGYALDFKCA LLPHEVKHRV DDHFLSLCYG 540
  541 ERDASGKYWC DICEKETDPT KWFYTCKDCG VTLHTNCVLG DFRGLEPETN IVLDDDRMQM 600
  601 TLYETVRNNS MSRPVCYKCK YHCIFPIILK VTDEDKYFCS ISCCDIKTLP FYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] FFAS03 2.3 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [65..130] PSI-BLAST 3.69897 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    3 View Details [131..356] MSA 7.172996 View MSA. No confident structure predictions are available.
    4 View Details [357..489] FFAS03 2.01 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    5 View Details [490..653] PSI-BLAST 4.045757 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    5
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle