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Protein Overview: DDPS2_ARATH

General Information:
Name(s) found: DDPS2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: dolichol biosynthetic process [IGI]
    Molecular Function: dehydrodolichyl diphosphate synthase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLRVPTPT SFDFRRYQAG DLERRWRLSR DSFLSFSPKF EENRGFRFGV KSSKSDVSFT  60
   61 AAEEEETLPE ELHAELMPKH VAIIMDGNGR WAKNRGLQPW DGHRAGVEAL KEIVELCGKW 120
  121 GIQVLTVFAF STDNWIRPRI EIDFLFSLFE RSLKTEFQNL AKNNVRISII GDSSKLPKSL 180
  181 LRVINEVEEV TKNNTRLQLI VAVGYSGKYD VLQACRGIAR RVKDGEIEVE EIDERLIEEE 240
  241 LETNCTEFPY PDLLIRTSGE LRVSNFLLWQ LAYTELFFAQ ELWPDFGRSG FIEALMSFQQ 300
  301 RQRRFGGRKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 90.69897 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.27318114514627 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • binding
    		•  0.458704366412361 bayes_pls_golite062009
  • transferase activity
    		•  0.273947729320601 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009
  • protein binding
    		•  0.11675780767527 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle