YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RR10_ARATH

General Information:
Name(s) found: RR10_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • 30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana GN=RPS10 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    small ribosomal subunit [ISS]
    Biological Process: translation [IEA][ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSTVSSFL LPSFGIPSSS PSSTRLKVSL LPSSSTHGGL SSCVLTKPSV SLTKVFAVPD  60
   61 TLDPTPEILD EPASEVPSSS SISVDADKMA PKQKIRIKLR SYWVPLIEDS CKQILDAARN 120
  121 TNAKTMGPVP LPTKKRIYCV LKSPHVHKDA RFHFEIRTHQ RMIDILYPTA QTIDSLMQLD 180
  181 LPAGVDVEVK L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..191] PSI-BLAST 37.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.82905885280588 bayes_pls_golite062009
  • structural molecule activity
    		•  9.25405593567362 bayes_pls_golite062009
  • binding
    		•  0.795193544824207 bayes_pls_golite062009
  • RNA binding
    		•  0.60427462690745 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.513619902565835 bayes_pls_golite062009
  • protein binding
    		•  0.180450584965049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle