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Protein Overview: TCP17_ARATH

General Information:
Name(s) found: TCP17_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8346544|emb|CAB93708.1| putative helix-loop-helix DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|75174021|sp|Q9LEZ9.1|TCP17_ARATH RecName: Full=Transcription factor TCP17 [NCBI NR]
  • gi|15241512|ref|NP_196424.1| TCP17 (TCP DOMAIN PROTEIN 17); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|124300962|gb|ABN04733.1| At5g08070 [Arabidopsis thaliana] [NCBI NR]
  • pir||T50492 probable helix-loop-helix DNA binding protein - Arabidopsis thaliana [NCBI NR]
  • Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1 [Swiss-Prot]
  • (Q9LEZ9) Putative helix-loop-helix DNA binding protein [athaliana3702.FASTAC.txt]
  • putative helix-loop-helix DNA binding protein [Arabidopsis thaliana]gi|11358650|pir||T50492 probable helix-loop-helix DNA binding protein - Arabidopsis thalianagi|15241512|ref|NP_196424.1| TCP family transcription factor, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 TCP family transcription factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TCP17 | TCP17 (TCP domain protein 17); transcription factor | chr5:2584886-2585614 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative helix-loop-helix DNA binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TCP17 | TCP domain protein 17 | chr5:2584885-2585613 FORWARD LENGTH=242 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell differentiation [IGI]
    positive regulation of development, heterochronic [IGI]
    regulation of transcription [TAS]
    leaf morphogenesis [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKKEDQKS SLSLLTQRWN NPRIVRVSRA FGGKDRHSKV CTVRGLRDRR IRLSVMTAIQ  60
   61 VYDLQERLGL SQPSKVIDWL LEVAKNDVDL LPPLQFPPGF HQLNPNLTGL GESFPGVFDL 120
  121 GRTQREALDL EKRKWVNLDH VFDHIDHHNH FSNSIQSNKL YFPTITSSSS SYHYNLGHLQ 180
  181 QSLLDQSGNV TVAFSNNYNN NNLNPPAAET MSSLFPTRYP SFLGGGQLQL FSSTSSQPDH 240
  241 IE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] Pfam 65.29243 No description for PF03634.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle