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Protein Overview: SPL15_ARATH

General Information:
Name(s) found: SPL15_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|67461582|sp|Q9M2Q6.1|SPL15_ARATH RecName: Full=Squamosa promoter-binding-like protein 15 [NCBI NR]
  • gi|6729535|emb|CAB67620.1| squamosa promoter-binding protein homolog [Arabidopsis thaliana] [NCBI NR]
  • gi|21592501|gb|AAM64451.1| squamosa promoter-binding protein homolog [Arabidopsis thaliana] [NCBI NR]
  • gi|15230904|ref|NP_191351.1| SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T46014 squamosa promoter-binding protein homolog - Arabidopsis thaliana [NCBI NR]
  • Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1 [Swiss-Prot]
  • (Q9M2Q6) Squamosa promoter-binding protein homolog [athaliana3702.FASTAC.txt]
  • squamosa promoter-binding protein homolog [Arabidopsis thaliana]gi|6729535|emb|CAB67620.1| squamosa promoter-binding protein homolog [Arabidopsis thaliana]gi|11282410|pir||T46014 squamosa promoter-binding protein homolog - Arabidopsis thalianagi|152309 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Squamosa-promoter binding-like protein 15 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | squamosa promoter-binding protein, putative | chr3:21455427-21456829 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • squamosa promoter-binding protein homolog [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Squamosa promoter-binding-like protein 15 [nr-271106-contam.fasta]
  • | Symbols: SPL15 | squamosa promoter binding protein-like 15 | chr3:21444450-21445852 REVERSE LENGTH=354 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of cell size [IMP]
    vegetative to reproductive phase transition of meristem [IGI]
    regulation of transcription [TAS]
    regulation of cell proliferation [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV RKSSTTARCQ  60
   61 VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC QQCSRFHQLS EFDLEKRSCR 120
  121 RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP 180
  181 GPWQINPVRE THPHMNVLSH GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP 240
  241 TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS 300
  301 PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 30.221849 Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 7
    2 View Details [138..205] PSI-BLAST 9.0 No description for 2h77A was found.
    3 View Details [206..354] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle