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Protein Overview: gi|9758381, gi|1...

General Information:
Name(s) found: gi|9758381 [NCBI NR]
gi|67633858 [NCBI NR]
gi|2660673 [NCBI NR]
gi|15241569 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|9758381|dbj|BAB08830.1| CHP-rich zinc finger protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|67633858|gb|AAY78853.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2660673|gb|AAC79144.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241569|ref|NP_199290.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLMLPFHE HPMTISNLYN HACDFCPGRP KPGTIFFCEK CDLDLHKGCA GKFLNNSSRC  60
   61 NHSLKIFQGR FGQFGEDDDY QCHYCQQNVG FHFARCTICN ISIDEKCLRN PPPLTIFQPK 120
  121 HHKHSLFLLG RLVAFTCNAC GVEGDRNPYI CIECNLMLHK ECTDLPRVIS INRHEHRISH 180
  181 TFHLGKGEGV WECGVCRKTI DCVYGAFICS RCPSSYAVHS RCATRKEVWD GIELEDVPEE 240
  241 DEELEDPFKV INEKGDIVHF SHEEHVLRLD VNYVHDNDTM CCGGCILPIN DDPCYKCVEC 300
  301 DFCLHKGCAS LPRKKAHFLH NHKISLRAHK DDVYVDKCGA CKTYSNGFKY ECHDKSSCRG 360
  361 NIKYDIRCSS ISEPFHHDDL HPHPLYWTLE ETKQCKACGT EILKPLSCLV CEYALCIRCA 420
  421 TLPKKVKHRC DDHFLSLCHD AGNSSGDLWC DICETKTDPS VCYYTCDKCG VSLHINCVLG 480
  481 DLYYTKVGLV YPGLEVLPNN GATRPFCNSC KVRCKFSFLM KQTLGDLVRY FCSIRCIPRA 540
  541 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 3.09691 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    2 View Details [111..429] FFAS03 1.22 Three dimensional structure of the oxidized form of nine heme cytochrome c at PH 7.5
    3 View Details [430..541] PSI-BLAST 4.221849 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle