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Protein Overview: TERT_ARATH

General Information:
Name(s) found: TERT_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Telomerase reverse transcriptase OS=Arabidopsis thaliana GN=TERT PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1123 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: nucleolus organization [IMP]
    chromosome organization [IGI]
    chromosome localization [IMP]
    telomere maintenance via telomerase [IGI][IMP]
    Molecular Function: telomerase activity [IDA]
    telomeric template RNA reverse transcriptase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKPRHRVP EILWRLFGNR ARNLNDAIVD LIPNRNIQPE QCRCRGQGCL GCSSDKPAFL  60
   61 LRSDDPIHYR KLLHRCFVVL HEQTPPLLDF SPTSWWSQRE IVERIIEMMQ SGCDCQNVIC 120
  121 ARYDKYDQSS PILELLTSSS WEFLLKRVGH DVMVYLLQQT SIFLPLLGKK HQQVSGPPLC 180
  181 IKHKRTLSVH ENKRKRDDNV QPPTKRQWLS SAVDDCPKDD SATITPIVGE DVDQHREKKT 240
  241 TKRSRIYLKR RRKQRKVNFK KVDCNAPCIT PSTNGKVSTG NDEMNLHIGI NGSLTDFVKQ 300
  301 AKQVKRNKNF KFGLSETYSV IPPNHILKTL RPNCSDSKLL MNHIFGEVNV WSTTPSHGKG 360
  361 NCPSGSICLY HSLLKSLKNL IGKTKSSHLK MLLDKHCPVL LLQEDALKSG TTSQSSRRQK 420
  421 ADKLPHGSSS SQTGKPKCPS VEERKLYCTN DQVVSFIWAI CRYIVPESLL GTTHQMRVLR 480
  481 KNIAWFVSRR RNEKCTVNQF LHKVKPSDFP FFARKELCCM VNGHELQSES IRSTQQMLCT 540
  541 KWISWLFLEI VKKLVHFNFY ATESQGGRLN IYYYRKRSWE RLISKEISKA LDGYVLVDDA 600
  601 EAESSRKKLS KFRFLPKANG VRMVLDFSSS SRSQSLRDTH AVLKDIQLKE PDVLGSSVFD 660
  661 HDDFYRNLCP YLIHLRSQSG ELPPLYFVVA DVFKAFDSVD QGKLLHVIQS FLKDEYILNR 720
  721 CRLVCCGKRS NWVNKILVSS DKNSNFSRFT STVPYNALQS IVVDKGENHR VRKKDLMVWI 780
  781 GNMLKNNMLQ LDKSFYVQIA GIPQGHRLSS LLCCFYYGHL ERTLIYPFLE EASKDVSSKE 840
  841 CSREEELIIP TSYKLLRFID DYLFVSTSRD QASSFYHRLK HGFKDYNCFM NETKFCINFE 900
  901 DKEEHRCSSN RMFVGDNGVP FVRWTGLLIN SRTFEVQVDY TRYLSGHISS TFSVAWQNKP 960
  961 VRNLRQKLCY FLVPKCHPIL FDSNINSGEI VRLNIYQIFL LAAMKFHCYV YEVSRFWKLH1020
 1021 PQTLFKFITI SVRYMFRLIN RRVRRINTGS SFRPVLKLYK EEVIWLGLDA YIQVLKKKNS1080
 1081 RYRMLLIYLK SALSKHSLSQ QLSSELRYAT DRSNSSSLWK LNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] MSA 3.051985 View MSA. No confident structure predictions are available.
    2 View Details [160..354] PSI-BLAST 28.30103 Endonuclease domain of human LINE1 ORF2p
    3 View Details [355..564] MSA 1.584994 View MSA. No confident structure predictions are available.
    4 View Details [565..654] deduced N/A No confident structure predictions are available.
    5 View Details [655..850] MSA 32.250996 View MSA. No confident structure predictions are available.
    6 View Details [851..932] deduced N/A No confident structure predictions are available.
    7 View Details [933..1123] MSA 9.014994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle