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Protein Overview: gi|15237609, gi|...

General Information:
Name(s) found: gi|15237609 [NCBI NR]
gi|10176954 [NCBI NR]
Description(s) found:
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  • gi|15237609|ref|NP_201211.1| anac103 (Arabidopsis NAC domain containing protein 103); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|10176954|dbj|BAB10274.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FMJ1) Similarity to NAM [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15237609|ref|NP_201211.1| no apical meristem (NAM) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 No apical meristem (NAM) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ANAC103 | ANAC103 (Arabidopsis NAC domain containing protein 103); transcription factor | chr5:25651044-25652378 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ANAC103; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: anac103, NAC103 | NAC domain containing protein 103 | chr5:25633818-25635152 REVERSE LENGTH=356 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NAC domain containing protein 103 OS=Arabidopsis thaliana GN=NAC103 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multicellular organismal development [ISS]
    regulation of transcription [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTNLAPGF RFHPTDVELV RYYLKRKVMG KKFQVDAIAE VDIYKFEPPD LPDKSCLGTG  60
   61 DLKWYFFCPR EKKYPKGGKA NRSTECGYWK TTGRDRDVSY NDEVTGKIRT LIYHYGKIPR 120
  121 GDRTDWVIHE YRLEDKVLAQ KNVPQDTYVL CVLFKKNGLG PRHGSQYGAP FKEEDWSDKE 180
  181 EEYTQNHLVA GPSKETSLAA KASHSYAPKD GLTGVISESC VSDVPPLTAT VLPPLTSDVI 240
  241 AYNPFSSSPL LEVPQVSLDG GELNSMLDLF SVDNDDCLLF DDFDYHNEVR HPDGFVNKEA 300
  301 PVFLGDGNFS GMFDLSNDQV VELQDLIQSP TPHPPSPPAQ ASIPDDSRSN GQTKDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 64.69897 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    2 View Details [179..356] MSA 6.258997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle