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Protein Overview: IDD2_ARATH

General Information:
Name(s) found: IDD2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein indeterminate-domain 2 OS=Arabidopsis thaliana GN=IDD2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: nucleic acid binding [ISS]
    zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVDLDNSST VSGEASVSIS STGNQNPLPN STGKKKRNLP GMPDPESEVI ALSPKTLLAT  60
   61 NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LRQKSNKEVK KKVYVCPEVS CVHHDPSRAL 120
  121 GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF 180
  181 ITHRAFCDAL AEENARSHHS QSKKQNPEIL TRKNPVPNPV PAPVDTESAK IKSSSTLTIK 240
  241 QSESPKTPPE IVQEAPKPTS LNVVTSNGVF AGLFESSSAS PSIYTTSSSS KSLFASSSSI 300
  301 EPISLGLSTS HGSSFLGSNR FHAQPAMSAT ALLQKAAQMG AASSGGSLLH GLGIVSSTST 360
  361 SIDAIVPHGL GLGLPCGGES SSGLKELMMG NSSVFGPKQT TLDFLGLGRA VGNGNGPSNG 420
  421 LSTLVGGGTG IDMATTFGSG EFSGKDISRR KS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] PSI-BLAST 19.30103 Transcription factor IIIA, TFIIIA
    2 View Details [100..299] PSI-BLAST 45.39794 No description for 2i13A was found.
    3 View Details [300..452] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle