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Protein Overview: gi|21700877, gi|...

General Information:
Name(s) found: gi|30699054 [NCBI NR]
gi|25406395 [NCBI NR]
gi|21700877 [NCBI NR]
gi|15222037 [NCBI NR]
gi|13937224 [NCBI NR]
gi|12323882 [NCBI NR]
Description(s) found:
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  • gi|30699054|ref|NP_849886.1| ADP-glucose pyrophosphorylase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G96778 hypothetical protein F9E10.24 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21700877|gb|AAM70562.1| At1g74910/F9E10_24 [Arabidopsis thaliana] [NCBI NR]
  • gi|15222037|ref|NP_177629.1| ADP-glucose pyrophosphorylase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13937224|gb|AAK50104.1|AF372967_1 At1g74910/F9E10_24 [Arabidopsis thaliana] [NCBI NR]
  • gi|12323882|gb|AAG51908.1|AC013258_2 putative GDP-mannose pyrophosphorylase; 64911-67597 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9P3) Putative GDP-mannose pyrophosphorylase (At1g74910/F9E10_24) [athaliana3702.FASTAC.txt]
  • At1g74910/F9E10_24 [Arabidopsis thaliana]gi|13937224|gb|AAK50104.1| At1g74910/F9E10_24 [Arabidopsis thaliana]gi|25406395|pir||G96778 hypothetical protein F9E10.24 [imported] - Arabidopsis thalianagi|12323882|gb|AAG51908.1| putative GDP-mannose pyrophos [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ADP-glucose pyrophosphorylase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ADP-glucose pyrophosphorylase family protein | chr1:28139431-28142117 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative GDP-mannose pyrophosphorylase; 64911-67597 [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • nucleotidyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g74910/F9E10_24 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ADP-glucose pyrophosphorylase family protein | chr1:28135770-28138456 REVERSE LENGTH=415 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ADP-glucose pyrophosphorylase-like protein OS=Arabidopsis thaliana GN=F9E10.24 PE=2 SV=1 [ARATH-contam.fasta]
  • ADP-glucose pyrophosphorylase family protein OS=Arabidopsis thaliana GN=F9E10.24 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: response to cadmium ion [IDA]
    biosynthetic process [ISS]
    Molecular Function: nucleotidyltransferase activity [IEA][ISS]
    transferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSMEEKVV AVIMVGGPTK GTRFRPLSLN IPKPLFPIAG QPMVHHPISA CKRIPNLAQI  60
   61 YLVGFYEERE FALYVSAISN ELKVPVRYLR EDKPHGSAGG LYHFRNLIME DSPSHIFLLN 120
  121 CDVCCSFPLP KMLEAHRGYG GIGTLLVIKV SPESASQFGE LVADPVTNEL LHYTEKPETF 180
  181 VSDRINCGVY VFTPEIFNAI GDVSTQRKDR ATLKRVSSFE ALQPATRIPT DFVRLDQDIL 240
  241 SPLAGKKRLY TYETMDFWEQ IKSPGMSLRC SGLYLSQFRL TSPQLLASGD GTRSAIVIGD 300
  301 VYIHPSAKVH PTAKIGPNVS ISANARVGPG VRLMSCIILD DVEIMENAVV TNAIVGWKSS 360
  361 IGRWSRVQAE GVYNSKLGVT ILGDSVAVED EVVVTSSIVL PNKTLNVSVQ DEIIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 61.522879 N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • mannosyltransferase activity
    		•  3.87594044828967 bayes_pls_golite062009
  • alpha-1,2-mannosyltransferase activity
    		•  3.78995004368368 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  3.74072767898515 bayes_pls_golite062009
  • transferase activity
    		•  3.32517438937547 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  3.09763291641741 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UTP:glucose-1-phosphate uridylyltransferase activity
    		•  2.65167602524122 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  2.62845487806844 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.51696952719873 bayes_pls_golite062009
  • UTP-monosaccharide-1-phosphate uridylyltransferase activity
    		•  2.46432078102948 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • mannose-1-phosphate guanylyltransferase activity
    		•  2.30953822963071 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.50551885980582 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
    		•  1.17181714897181 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • binding
    		•  1.09657219604879 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.741838450922005 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.717805296858439 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.555398952276587 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.513376694534047 bayes_pls_golite062009
  • O-acyltransferase activity
    		•  0.319932817519902 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.218759888732981 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle