YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|11280574, gi|...

General Information:
Name(s) found: gi|9798385 [NCBI NR]
gi|15230519 [NCBI NR]
gi|11280574 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|9798385|emb|CAC03532.1| non-phototropic hypocotyl 3-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230519|ref|NP_190068.1| phototropic-responsive NPH3 family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51779 non-phototropic hypocotyl 3-like protein - Arabidopsis thaliana [NCBI NR]
  • (Q9FYC8) Non-phototropic hypocotyl 3-like protein [athaliana3702.FASTAC.txt]
  • non-phototropic hypocotyl 3-like protein [Arabidopsis thaliana]gi|11280574|pir||T51779 non-phototropic hypocotyl 3-like protein - Arabidopsis thalianagi|15230519|ref|NP_190068.1| phototropic-responsive NPH3 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phototropic-responsive NPH3 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phototropic-responsive NPH3 family protein | chr3:16372851-16375396 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein binding / signal transducer [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • non-phototropic hypocotyl 3-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to light stimulus [IEA][ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVAKVSEF HREGNDWYKP LSLSHYLHLR DLKVCSFIQF FTCQVISKIL LKETGIGIFR  60
   61 FCKTGLSSDI TVVVDDVKFH LHKFPLVSKC GKLARMYEDS KSTDKQSLWT TVLEEFPGGA 120
  121 DNFLIVARFC YGARVDITSK NLVSIHCAAE YLEMTNEYGE DNLISQVETF LHKHVLRNWK 180
  181 DCILALQSSS PVLKSAEKLQ MIPKLMNAVS TMVCTDPSLF GWPMMMYGTL QSPGGSILWN 240
  241 GINTGARMRS SGSDWWYEDI SYLSVDLFKR LIKTMETKGI RAESLAGAMM YYARKYLPGL 300
  301 GRWQSGTSDS SKSRRRVVSF NLAKASSPSS MPPLDQIALL ETILSLLPEK RGRSFCKFLL 360
  361 GLLRVAFILG VDGNCVKKLE KRIGMQLELA TLDNLLILNY SDSETLYNVD CVERIVRHFW 420
  421 RLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ 480
  481 LCNIMDYQRL SIDACAHASH NDRLPLRVVL QVLFFEQMHL RTALAGGLNV ANTETAHAVT 540
  541 IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS 600
  601 SMSSPRLVKL GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF 660
  661 G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] PSI-BLAST 23.09691 No description for 2nn2A was found.
    2 View Details [201..348] MSA 5.634996 View MSA. No confident structure predictions are available.
    3 View Details [349..470] MSA 2.143991 View MSA. Confident ab initio structure predictions are available.
    4 View Details [471..661] MSA 3.074981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle