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Protein Overview: SDRA_ARATH

General Information:
Name(s) found: SDRA_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis thaliana] [NCBI NR]
  • gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity to Pfam families PF00106 (short chain dehydrogenase; score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain dehydrogenase/reductase C-terminus; score=48.9, E=1.1e-10, N=1) [Arabidopsis thaliana] [NCBI NR]
  • pir||E85069 hypothetical protein AT4g05530 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21593394|gb|AAM65343.1| putative tropinone reductase [Arabidopsis thaliana] [NCBI NR]
  • gi|21281153|gb|AAM44948.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18412959|ref|NP_567300.1| IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • gi|14334866|gb|AAK59611.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Short-chain dehydrogenase/reductase SDRA OS=Arabidopsis thaliana GN=SDRA PE=1 SV=1 [Swiss-Prot]
  • (Q9S9W2) T1J24.9 protein (AT4G05530 protein) (Putative short chain dehydrogenase) (Hypothetical protein) (Putative tropinone reductase) [athaliana3702.FASTAC.txt]
  • putative tropinone reductase [Arabidopsis thaliana]gi|21281153|gb|AAM44948.1| unknown protein [Arabidopsis thaliana]gi|14334866|gb|AAK59611.1| unknown protein [Arabidopsis thaliana]gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis thaliana]gi|5732060| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Short-chain dehydrogenase/reductase (SDR) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:2816459-2818071 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g05530 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative tropinone reductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to Pfam families PF00106 (short chain dehydrogenase; score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain dehydrogenase/reductase C-terminus; score=48.9, E=1.1e-10, N=1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: IBR1, SDRA | indole-3-butyric acid response 1 | chr4:2816462-2818074 FORWARD LENGTH=254 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g05530 protein OS=Arabidopsis thaliana GN=T1J24.9 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: indolebutyric acid metabolic process [IMP]
    response to indolebutyric acid stimulus [IMP]
    Molecular Function: oxidoreductase activity [IEA][ISS]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI  60
   61 DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP STDPILSSKE AVLDKLWEIN 120
  121 VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD 180
  181 TRVNAVAPGF VPTHFASFIT GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT 240
  241 GETLVVAGGM PSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 64.30103 No description for 2p68A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle