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Protein Overview: gi|15240021, gi|...

General Information:
Name(s) found: gi|9758415 [NCBI NR]
gi|15240021 [NCBI NR]
Description(s) found:
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  • gi|9758415|dbj|BAB08957.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15240021|ref|NP_196253.1| binding [Arabidopsis thaliana] [NCBI NR]
  • (Q9FNH3) Similarity to unknown protein [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15240021|ref|NP_196253.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | binding | chr5:1938782-1944198 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 890 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRSKAPAKK QQKKGIDFKK IKRKLGRKLP PPKNATNTEI KSKAIILPEQ SVAAEKSGLA  60
   61 TSKKGLTLKE LLPQTSHHNA KVRKDALYGI KDLFKNHPEE LQSHKYAIIQ KLRERISDDD 120
  121 KLVRDVFYQL FDIDIFPLCK EDNQGLMVSL LMPYIFSAMA HSAIDVRLMA FKFFHLVVEF 180
  181 YPPTFSLDAE KILENYKDII QKNHFYVEDK SKLKVALSGL SHCLSVLPCD ESDTKSQKKG 240
  241 PSQNETLLTY EQDATKDCVL YSILTKFLRI LTGYAHVYQR LKEVVAVLIN CFQDFIPLIH 300
  301 APRGFDAHSF DCIQHILRSI GYAIKFSIRR HKQRQTAWRP ASEEVTLMIL DQDIASMLLK 360
  361 KLLGSFPLDP ENNLYGKGDD KYFKLNSVLT EIFLEVSEWS HLPTDLSNRY LEFIENTLLG 420
  421 KITRSIRLRK DIHEKTLLAL LPFLPKLILR VDRDWRDNLL EAFTITFSDC KPESKLKLAC 480
  481 ISTVRDMIIP NGDILYPNAS DPTVHYYQVA WVNKLPSLLN QLGNEHPVST QVVLQLLLDL 540
  541 GRVGCLNASP TCEDDIRNFF SLCQGEGDVP GGPFASLPRE AQELALCFLY YFTTDKFSSP 600
  601 MMKAIVSCCL YPQLEPAVLY RIVEILHTAY RAGYIQITDH FSFLITLIAR FKVVPEKLQS 660
  661 SIECNERETY CGTFKEVTKL VCSCLSEMGD SSLVLQIVEK VLLEQIVLKP ALDNGCAILR 720
  721 MICVLDSTPT TLSERSVTTL SEFLPGYMIN IVNCIPEDKE NSYLYIQTCL YYLVPCYFLF 780
  781 NRSSKLTEQV LIRMRSMISE NTKALESVQD RESGRNSLNM IQCIISVILL MHNDVKVRKI 840
  841 ISSFKPEIDL ILQNVITLQS SRSTSLTVEG KHMMKIAGER LRIASKSLLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..593] PSI-BLAST 78.69897 No description for 2qmrA was found.
    2 View Details [594..662] deduced N/A No confident structure predictions are available.
    3 View Details [663..890] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle