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Protein Overview: ORP1D_ARATH

General Information:
Name(s) found: ORP1D_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 816 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: steroid metabolic process [IEA][ISS]
    Molecular Function: oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS  60
   61 SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY KWVNYGKGWR ARWFELEDGV 120
  121 LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE 180
  181 IHLKVSSIRA SKSDDKRLAI FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL 240
  241 PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ 300
  301 LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE 360
  361 DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF SDRLQIPARI PQYPYVRRRD 420
  421 NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE 480
  481 WGKQGNELMR ILNIAAFAVS GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH 540
  541 PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI 600
  601 ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW 660
  661 DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN LSPFAISLNE ITPGMIDKLP 720
  721 PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG 780
  781 GYWEAREKKD WDRITDIFKK QQQRNSLSSS SSSTFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 25.154902 No description for 2r0dA was found.
    2 View Details [237..413] deduced N/A No confident structure predictions are available.
    3 View Details [414..816] PSI-BLAST 58.0 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle