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Protein Overview: SCL3_ARATH

General Information:
Name(s) found: SCL3_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to gibberellin stimulus [IEP]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT  60
   61 CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE ALANRILKSW PGLYKALNAT 120
  121 QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA 180
  181 LLQAFNSRPE GPPHLRITGV HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE 240
  241 QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA 300
  301 RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME 360
  361 RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK NIISCEGFER RERHEKLEKW 420
  421 SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC 480
  481 RK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] MSA 5.12198 View MSA. No confident structure predictions are available.
    2 View Details [162..284] MSA 2.126959 View MSA. Confident ab initio structure predictions are available.
    3 View Details [285..482] MSA 4.128965 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle