Protein Overview: RPD2B_ARATH

General Information:
Name(s) found:	RPD2B_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9294064\|dbj\|BAB02021.1\| DNA-dependent RNA polymerase II [Arabidopsis thaliana] [NCBI NR] DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b PE=2 SV=1 [Swiss-Prot] (Q9LV32) DNA-dependent RNA polymerase II (EC 2.7.7.6) (DNA-directed RNA polymerase beta chain) [athaliana3702.FASTAC.txt] DNA-dependent RNA polymerase II [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 DNA-dependent RNA polymerase II [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	1119 amino acids
Gene Ontology:
Cellular Component:	membrane [IDA]
Biological Process:	[NOT]gene silencing [IMP] transcription [ISS]
Molecular Function:	DNA binding [IEA][ISS] DNA-directed RNA polymerase activity [IEA][ISS] ribonucleoside binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDEIESAG QINISELGES FLQTFCKKAA TSFFEEFGLI SHQLNSYNFF IEHGLQNVFE  60
   61 SFGDILVEPS FDVIKKKDGD WRYATVFKKI VIKHDKFKTG QDEYVEKEIL DVKKQDILIG 120
  121 SIPVMVKSVL CKTSEKGKEN CKKGNCAFDQ GGYFVIKGAE KVFIAQEQMC TKRLWISNSP 180
  181 WTVSFRSETK RNRFIVRLSE NEKAEDYKIM EKVLTVYFLS TEIPVWLLFF ALGVSSDKEA 240
  241 MDLIAFDGDD ASITNSLIAS IHEADAVCEA FRCGNNALTY VEHQIKSTKF PPAESVDDCL 300
  301 RLYLFPCLQG LKKKARFLGY MVKCLLSAYA GKRKCENRDS FRNKRIELAG ELLEREIRVH 360
  361 LAHARRKMTR AMQKQLSGDG DLKPIEHYLD ASVITNGLNR AFSTGAWSHP FRKMERVSGV 420
  421 VANLGRANPL QTLIDLRRTR QQVLYTGKVG DARHPHPSHW GRVCFLSTPD GENCGLVKNM 480
  481 SLLGLVSTQG LESVVEMLFT CGMEELMNDT STPLCGKHKV LLNGDWVGLC ADSESFVGEL 540
  541 KSRRRQSELP LEMEIKRDKD DNEVRIFTDA GRLLRPLLVV ENLHKLKQDK PTQYPFKHLL 600
  601 DQGILELIGI EEEEDCTTAW GIKQLLKEPK NYTHCELDLS FLLGVSCAIV PFANHDHGKR 660
  661 VLYQSQKHCQ QAIGFSSTNP NIRCDTLSQQ LFYPQKPLFK TLASECLEKE VLFNGQNAIV 720
  721 AVNVHLGYNQ EDSIVMNKAS LERGMFRSEQ IRSYKAEVDT KDSEKRKKMD ELVQFGKTYS 780
  781 KIGKVDSLED DGFPFIGANM STGDIVIGRC TESGADHSIK LKHTERGIVQ KVVLSSNDEG 840
  841 KNFAAVSLRQ VRSPCLGDKF SSMHGQKGVL GYLEEQQNFP FTIQGIVPDI VINPHAFPSR 900
  901 QTPGQLLEAA LSKGIACPIQ KKEGSSAAYT KLTRHATPFS TPGVTEITEQ LHRAGFSRWG 960
  961 NERVYNGRSG EMMRSLIFMG PTFYQRLVHM SENKVKFRNT GPVHPLTRQP VADRKRFGGI1020
 1021 RFGEMERDCL IAHGASANLH ERLFTLSDSS QMHICRKCKT YANVIERTPS SGRKIRGPYC1080
 1081 RVCASSDHVV RVYVPYGAKL LCQELFSMGI TLNFDTKLC

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.92

Protein Overview: RPD2B_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: