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Protein Overview: gi|20198000, gi|...

General Information:
Name(s) found: gi|42569659 [NCBI NR]
gi|20198000 [NCBI NR]
gi|10443853 [NCBI NR]
Description(s) found:
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  • gi|42569659|ref|NP_565831.3| E2F3 (E2F TRANSCRIPTION FACTOR 3); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|20198000|gb|AAD21456.2| putative E2F5 family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|10443853|gb|AAG17610.1|AF242582_1 E2F transcription factor-3 E2F3 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SJ49) Putative E2F5 family transcription factor (E2F transcription factor-3 E2F3) [athaliana3702.FASTAC.txt]
  • putative E2F5 family transcription factor [Arabidopsis thaliana]gi|10443853|gb|AAG17610.1| E2F transcription factor-3 E2F3 [Arabidopsis thaliana]gi|42569659|ref|NP_565831.3| E2F transcription factor-3 (E2F3) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 E2F transcription factor-3 (E2F3) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATE2FA, E2F3 | E2F3 (E2F TRANSCRIPTION FACTOR-3); transcription factor | chr2:15126767-15129972 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative E2F5 family transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • E2F3 (E2F TRANSCRIPTION FACTOR-3); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • E2F transcription factor-3 E2F3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: E2F3, ATE2FA | E2F transcription factor 3 | chr2:15119688-15122893 FORWARD LENGTH=483 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA [ARATH-contam.fasta]
  • Isoform of Q9FNY0, Isoform 2 of Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: transcription factor complex [IEA]
    chloroplast [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF  60
   61 NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM DMVVAPSNNG FTSSGFTNIP 120
  121 SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV 180
  181 NLIKQAKDGM LDLNKAAETL EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE 240
  241 DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN 300
  301 QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG 360
  361 AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH PQPGDTSDLN YLQEQVGGML 420
  421 KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS 480
  481 TPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] MSA 21.115997 View MSA. No confident structure predictions are available.
    2 View Details [157..231] PSI-BLAST 24.0 Cell cycle transcription factor E2F-4
    3 View Details [232..402] PSI-BLAST 28.522879 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer
    4 View Details [403..483] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle