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Protein Overview: gi|15232291, gi|...

General Information:
Name(s) found: gi|7576205 [NCBI NR]
gi|15232291 [NCBI NR]
gi|11255842 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|7576205|emb|CAB87866.1| SRG1-like protein [Arabidopsis thaliana] [NCBI NR]
  • ref|NP_191588.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49224 SRG1-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biosynthetic process [ISS]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETNKSVVN DYFTSAMELT ESGDPHVPTR YILPPSQRPM LGPSIGTSTI NLPVIDLSFL  60
   61 HDPLLRLCVI HEIELACKGF GFFQVINHGI SSAVVKDAQD SATRFFDLPA DEKMHLVSDN 120
  121 FQEPVREKVG KYAEATHVLH KQLIEAISES LGLEKNYLQE EIEEGSQVMA VNCYPACPEP 180
  181 EIALGMPPHS DYGSLTILLQ SSEGLQIKDC NNNWVCVPYI EGALIVQLGD QVEVMSNGIY 240
  241 KSVVHRVTVN KDYKRLSFAS LHSLPMHKKI SPATQLVNEN KPAAYGEFSF NDFLDYISRN 300
  301 DITQKRFIDT LRKKNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..316] PSI-BLAST 75.69897 No description for 2brtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle