YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|225898108, gi...

General Information:
Name(s) found: gi|4335740 [NCBI NR]
gi|25411663 [NCBI NR]
gi|225898108 [NCBI NR]
gi|15226613 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|4335740|gb|AAD17418.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G84532 probable C2H2-type zinc finger protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|225898108|dbj|BAH30386.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226613|ref|NP_179176.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 329 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: nucleic acid binding [ISS]
    zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSMPNKFNP HCDDNNRGFS SIQMNQNSQM VHSRFITSDH TNHGDLFSSS PSFSCFHNSH  60
   61 ASSSSFGFQN SHVENHMMKR NIISDDNYFS ITNNPHFTRV SFTQTITNKF TAIVPTNTLD 120
  121 AVQYDAQRVK RAMNPKTNIW NPIFSPPNTF DKQCEFLNPK PLNVIFPSQN SAYPQHLDMF 180
  181 SLSSKHNHDQ RVLQDGRSMK KILKPTIFFE ATTDYIESQE NEKSNNDHND GRTHSLPYEK 240
  241 YGPYTCPKCN GVFNTSQKFA AHMSSHYKNE TSEEREQRIR AKNKRKFCKL NREINGEPQK 300
  301 TKQEDVANNS EKSDDKTFQH LVVVKEELV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] deduced N/A No confident structure predictions are available.
    2 View Details [189..329] FFAS03 1.01 Solution Structure of a Human C2H2-type Zinc Finger Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle