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Protein Overview: NOP5B_ARATH

General Information:
Name(s) found: NOP5B_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 533 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    nucleolus [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA  60
   61 VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK LKIDCIHNNA VMELLRGVRS 120
  121 QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM 180
  181 RVREWYGWHF PELAKIISDN ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS 240
  241 MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH 300
  301 GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS 360
  361 LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK DLGRLSGSSK GKPKIEVYNK 420
  421 DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK 480
  481 KKKKAEAETE AVVEVAKEEK KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 84.221849 No description for 2nnwA was found.
    2 View Details [399..533] MSA 3.126997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle