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Protein Overview: VP321_ARATH

General Information:
Name(s) found: VP321_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75100551|sp|O82197.1|VP321_ARATH RecName: Full=Vacuolar protein sorting-associated protein 32 homolog 1; Short=AtVPS32-1; AltName: Full=Charged multivesicular body protein 4 homolog 1; AltName: Full=ESCRT-III complex subunit VPS32 homolog 1 [NCBI NR]
  • gi|3687235|gb|AAC62133.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana] [NCBI NR]
  • pir||F84581 copia-like retroelement pol polyprotein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|19310843|gb|AAL85152.1| putative copia retroelement pol polyprotein [Arabidopsis thaliana] [NCBI NR]
  • gi|15224854|ref|NP_179573.1| SNF7.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15028177|gb|AAK76585.1| putative copia retroelement pol polyprotein [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=1 SV=1 [Swiss-Prot]
  • (O82197) Copia-like retroelement pol polyprotein (Putative copia retroelement pol polyprotein) [athaliana3702.FASTAC.txt]
  • putative copia retroelement pol polyprotein [Arabidopsis thaliana]gi|15028177|gb|AAK76585.1| putative copia retroelement pol polyprotein [Arabidopsis thaliana]gi|3687235|gb|AAC62133.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]gi|25 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SNF7 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SNF7.2 | SNF7.2 | chr2:8565183-8566471 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative copia retroelement pol polyprotein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copia-like retroelement pol polyprotein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SNF7.2, VPS32 | SNF7 family protein | chr2:8558101-8559389 REVERSE LENGTH=213 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: ESCRT III complex [ISS]
    plasma membrane [IDA]
    Biological Process: vesicle-mediated transport [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMNRLFGKP KQETSTLQTL DKLNETLEML EKKENVLLKK ATGEVEKAKE FSRAKNKRAA  60
   61 IQCLKRKRLY EQQVEQLGNF QLRIHDQMIM LEGAKATTET VDALRTGASA MKAMQKATNI 120
  121 DDVDKTMDEI NEQTENMKQI QEALSAPFGA NDFDEDELEA ELDELEGAEL EEQLLQPVPI 180
  181 HVPQGNKPAR APAQKQPTAE EDELAALQAE MAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 19.0 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle