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Protein Overview: SRO5_ARATH

General Information:
Name(s) found: SRO5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|17386160|gb|AAL38626.1|AF446893_1 AT5g62520/K19B1_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|15450639|gb|AAK96591.1| AT5g62520/K19B1_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|15241862|ref|NP_201058.1| SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|10178083|dbj|BAB11502.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • Probable inactive poly [ADP-ribose] polymerase SRO5 OS=Arabidopsis thaliana GN=SRO5 PE=1 SV=1 [Swiss-Prot]
  • (Q9FJJ3) Genomic DNA, chromosome 5, TAC clone:K19B1 (AT5g62520/K19B1_13) [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|17386160|gb|AAL38626.1| AT5g62520/K19B1_13 [Arabidopsis thaliana]gi|15450639|gb|AAK96591.1| AT5g62520/K19B1_13 [Arabidopsis thaliana]gi|15241862|ref|NP_201058.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a protein with similarity to RCD1 but without the WWE domain [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SRO5 | SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase | chr5:25115297-25116490 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT5g62520/K19B1_13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SRO5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SRO5 | similar to RCD one 5 | chr5:25098071-25099264 FORWARD LENGTH=309 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: oxygen and reactive oxygen species metabolic process [IMP]
    response to salt stress [IEP]
    Molecular Function: NAD+ ADP-ribosyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYVRTQVEA VFDDSEQDGS TISESGSCDS SSDRSFADEL GLMELLEGDK AHDLIYRNCK  60
   61 SGLGDQCQIL SVLRNGFRNV GSRAKLKTFQ VFQEAVQMKH GGDGGAKVKY GWCSVSKHEL 120
  121 KTIFEYGFSE PLRNDGSFGR GLYLSPDNSP LDCLKDSASE SEDGMRFLLL CRVLLGKSEI 180
  181 VPQGSTRSCP SSPEFDSGVD DLVSTKKYIV WSTHMNTHVL PEFLVCIKAP FNLTRSPKRL 240
  241 RSPWMAFPVL IKALSKFLPP SQILVIQKHY KDQQNRRITR SELIQRVRSI TGDKLLVHII 300
  301 KACGHKVQH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 46.154902 Crystal structure of catalytic domain of human poly(ADP-ribose) polymerase with a novel inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.35655888612093 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle