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Protein Overview: GATA1_ARATH

General Information:
Name(s) found: GATA1_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: circadian rhythm [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMESFMDDL LNFSVPEEEE DDDEHTQPPR NITRRKTGLR PTDSFGLFNT DDLGVVEEED  60
   61 LEWISNKNAF PVIETFVGVL PSEHFPITSL LEREATEVKQ LSPVSVLETS SHSSTTTTSN 120
  121 SSGGSNGSTA VATTTTTPTI MSCCVGFKAP AKARSKRRRT GRRDLRVLWT GNEQGGIQKK 180
  181 KTMTVAAAAL IMGRKCQHCG AEKTPQWRAG PAGPKTLCNA CGVRYKSGRL VPEYRPANSP 240
  241 TFTAELHSNS HRKIVEMRKQ YQSGDGDGDR KDCG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] MSA 11.230996 View MSA. No confident structure predictions are available.
    2 View Details [161..274] PSI-BLAST 13.0 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle