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Protein Overview: DOF35_ARATH

General Information:
Name(s) found: DOF35_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T08455 hypothetical protein F22O6.180 - Arabidopsis thaliana [NCBI NR]
  • gi|55584005|sp|Q9SVC5.1|DOF35_ARATH RecName: Full=Dof zinc finger protein DOF3.5; Short=AtDOF3.5 [NCBI NR]
  • gi|4886283|emb|CAB43436.1| putative DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231220|ref|NP_190812.1| Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1 [Swiss-Prot]
  • (Q9SVC5) Putative DNA-binding protein [athaliana3702.FASTAC.txt]
  • putative DNA-binding protein [Arabidopsis thaliana]gi|7486005|pir||T08455 hypothetical protein F22O6.180 - Arabidopsis thalianagi|15231220|ref|NP_190812.1| Dof-type zinc finger domain-containing protein [Arabidopsis thaliana]gi|55584005|sp|Q9SVC5|DF35_ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hypothetical Dof zinc finger protein DOF3.5 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | Dof-type zinc finger domain-containing protein | chr3:19446425-19447168 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative DNA-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Hypothetical Dof zinc finger protein DOF3.5 (AtDOF3.5) [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Dof-type zinc finger DNA-binding family protein | chr3:19435447-19436190 FORWARD LENGTH=247 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT  60
   61 KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG GGSPSIDLAL VYANFLNPKP 120
  121 DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP 180
  181 FPGEELLSLD TNGVWSDALL IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP 240
  241 FDFTADG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] FFAS03 0.963 RBP9 subunit of RNA polymerase II
    2 View Details [87..247] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle