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Protein Overview: glb-30

General Information:
Name(s) found: glb-30 / CE40783 [WormBase]
Description(s) found:
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  • WBGene00021259 locus:glb-30 status:Confirmed UniProt:G5EF00 protein_id:CCD73770.1 [WormBase]
  • gi|193210691|ref|NP_497442.2| GLoBin family member (glb-30) [Caenorhabditis elegans] [NCBI NR]
  • gi|129772249|gb|ABO31386.1| globin [Caenorhabditis elegans] [NCBI NR]
  • gi|126541613|gb|ABO16460.1| Globin protein 30, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE40783 WBGene00021259 locus:glb-30 status:Confirmed UniProt:A3KFD3_CAEEL protein_id:ABO16460.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40783 WBGene00021259 locus:glb-30 status:Confirmed UniProt:A3KFD3_CAEEL protein_id:ABO16460.1| [wormORF-contam.fasta]
  • CE40783 WBGene00021259 status:Partially_confirmed TR:A3KFD3 protein_id:ABO16460.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40783 WBGene00021259 locus:glb-30 status:Confirmed UniProt:A3KFD3 protein_id:ABO16460.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40783 WBGene00021259 locus:glb-30 status:Confirmed UniProt:G5EF00 protein_id:CCD73770.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • GLoBin related OS=Caenorhabditis elegans GN=glb-30 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLSHLTPI DREILNKSWG IVSKDMQQVA VNIFQMIFEQ APDAKLMFSF MMKDYKEDKK  60
   61 SNEFIFHAVR FLQVIESTMT HLEDPAQLDA VFLNLGKIHA KHEEQLGFSA HYWSVFKECV 120
  121 LFHFRKAMKS HNKFHKRNEM SFAEIDSAII LWREVLRFII DRMKVGYSES GAIRKSNKQA 180
  181 INGQHSISGD DSGLSSGLSV ETKQDLTQVK ISAFSGRQHR TASTRHSLAY ITATPAEPMT 240
  241 SSTCNFLKTL ASMSPKCVRR RFSASPNARM HV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] PSI-BLAST 48.30103 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.52421953607929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle