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Protein Overview: SH3P1_ARATH

General Information:
Name(s) found: SH3P1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||D86440 unknown protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21281229|gb|AAM45032.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19424043|gb|AAL87310.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16974676|gb|AAL32438.1|AF367773_1 SH3 domain-containing protein 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15221714|ref|NP_174429.1| SH3 domain-containing protein 1 (SH3P1) [Arabidopsis thaliana] [NCBI NR]
  • gi|12322535|gb|AAG51264.1|AC027135_5 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • SH3 domain-containing protein 1 OS=Arabidopsis thaliana GN=SH3P1 PE=1 SV=1 [Swiss-Prot]
  • (Q9C865) Hypothetical protein (SH3 domain-containing protein 1) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|19424043|gb|AAL87310.1| unknown protein [Arabidopsis thaliana]gi|16974676|gb|AAL32438.1| SH3 domain-containing protein 1 [Arabidopsis thaliana]gi|25403116|pir||D86440 unknown protein [imported] - Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SH3 domain-containing protein 1 (SH3P1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | SH3 domain-containing protein 1 (SH3P1) | chr1:11256131-11258460 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • clathrin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SH3 domain-containing protein 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | SH3 domain-containing protein | chr1:11256150-11258479 REVERSE LENGTH=439 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g31440 OS=Arabidopsis thaliana GN=T8E3.10 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IDA]
    plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: clathrin binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL  60
   61 QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN TPLSRVAHHF GTSYKSVEGE 120
  121 RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD 180
  181 ISEEAYIKLK NSESRLAELK SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH 240
  241 RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK 300
  301 ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ 360
  361 LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG TGWSEGEYKG KAGWFPSAYV 420
  421 EKQEKAPASK IVESNSKQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 17.09691 No description for 2ficA was found.
    2 View Details [255..439] PSI-BLAST 17.39794 No description for 2h8hA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.375837873453985 bayes_pls_golite062009
  • protein binding
    		•  0.25580402341401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle