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Protein Overview: gi|18399930, gi|...

General Information:
Name(s) found: gi|9294528 [NCBI NR]
gi|50897250 [NCBI NR]
gi|18399930 [NCBI NR]
gi|110738874 [NCBI NR]
Description(s) found:
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  • gi|9294528|dbj|BAB02791.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|50897250|gb|AAT85764.1| At3g13230 [Arabidopsis thaliana] [NCBI NR]
  • gi|18399930|ref|NP_566450.1| RNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|110738874|dbj|BAF01359.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LTU6) Gb|AAF50915.1 [athaliana3702.FASTAC.txt]
  • At3g13230 [Arabidopsis thaliana]gi|9294528|dbj|BAB02791.1| unnamed protein product [Arabidopsis thaliana]gi|18399930|ref|NP_566450.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | RNA binding | chr3:4270430-4271077 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g13230 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | RNA-binding KH domain-containing protein | chr3:4270423-4271070 FORWARD LENGTH=215 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g13230 OS=Arabidopsis thaliana GN=At3g13230 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESTQMEVE TATEGTVPLP PKPTFKPLKA HEMSDGKVQF RKIAVPPNRY SPLKKAWLDI  60
   61 YTPIYDQMKV DIRMNLKARK VELKTRADTP DISNLQKSAD FVHAFMLGFD IPDAISLLRM 120
  121 DELYVESFEI KDVKTLKGEH LSRAIGRLSG KGGKTKFAIE NSTKTRIVIA DTRIHILGAF 180
  181 SNIKVARSSL CSLIMGSPAG KVYSKLRSVS ARLNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 21.69897 No description for 2annA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle