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Protein Overview: RH47_ARATH

General Information:
Name(s) found: RH47_ARATH [Swiss-Prot]
Description(s) found:
Found 24 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    plasmodesmata-mediated intercellular transport [IMP]
    Molecular Function: RNA helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTSTRFL VLLKDFSAFR KISWTCAATN FHRQSRFLCH VAKEDGSLTL ASLDLGNKPR  60
   61 KFGKGKAMKL EGSFVTEMGQ GKVRAVKNDK MKVVKEKKPA EIVSPLFSAK SFEELGLPDS 120
  121 LLDSLEREGF SVPTDVQSAA VPAIIKGHDA VIQSYTGSGK TLAYLLPILS EIGPLAEKSR 180
  181 SSHSENDKRT EIQAMIVAPS RELGMQIVRE VEKLLGPVHR RMVQQLVGGA NRMRQEEALK 240
  241 KNKPAIVVGT PGRIAEISKG GKLHTHGCRF LVLDEVDELL SFNFREDIHR ILEHVGKRSG 300
  301 AGPKGEVDER ANRQTILVSA TVPFSVIRAA KSWSHEPVLV QANKVTPLDT VQPSAPVMSL 360
  361 TPTTSEADGQ IQTTIQSLPP ALKHYYCISK HQHKVDTLRR CVHALDAQSV IAFMNHSRQL 420
  421 KDVVYKLEAR GMNSAEMHGD LGKLGRSTVL KKFKNGEIKV LVTNELSARG LDVAECDLVV 480
  481 NLELPTDAVH YAHRAGRTGR LGRKGTVVTV CEESQVFIVK KMEKQLGLPF LYCEFVDGEL 540
  541 VVTEEDKAII R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..551] PSI-BLAST 91.69897 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle