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Protein Overview: PARG1_ARATH

General Information:
Name(s) found: PARG1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75206423|sp|Q9SKB3.2|PARG1_ARATH RecName: Full=Poly(ADP-ribose) glycohydrolase 1 [NCBI NR]
  • gi|20197842|gb|AAD32285.2| putative poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|18402797|ref|NP_565730.1| TEJ (Sanskrit for 'bright'); poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|14701908|gb|AAK72256.1|AF394690_1 poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [NCBI NR]
  • Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana GN=PARG1 PE=1 SV=2 [Swiss-Prot]
  • (Q9SKB3) Putative poly(ADP-ribose) glycohydrolase [athaliana3702.FASTAC.txt]
  • putative poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana]gi|14701908|gb|AAK72256.1| poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana]gi|18402797|ref|NP_565730.1| poly (ADP-ribose) glycohydrolase (PARG) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Poly (ADP-ribose) glycohydrolase (PARG) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TEJ | TEJ (SANSKRIT FOR 'BRIGHT'); poly(ADP-ribose) glycohydrolase | chr2:13557076-13560833 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TEJ; poly(ADP-ribose) glycohydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (PARG) | chr2:13549999-13553756 REVERSE LENGTH=548 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: defense response to fungus [IMP]
    Molecular Function: poly(ADP-ribose) glycohydrolase activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENREDLNSI LPYLPLVIRS SSLYWPPRVV EALKAMSEGP SHSQVDSGEV LRQAIFDMRR  60
   61 SLSFSTLEPS ASNGYAFLFD ELIDEKESKR WFDEIIPALA SLLLQFPSLL EVHFQNADNI 120
  121 VSGIKTGLRL LNSQQAGIVF LSQELIGALL ACSFFCLFPD DNRGAKHLPV INFDHLFASL 180
  181 YISYSQSQES KIRCIMHYFE RFCSCVPIGI VSFERKITAA PDADFWSKSD VSLCAFKVHS 240
  241 FGLIEDQPDN ALEVDFANKY LGGGSLSRGC VQEEIRFMIN PELIAGMLFL PRMDDNEAIE 300
  301 IVGAERFSCY TGYASSFRFA GEYIDKKAMD PFKRRRTRIV AIDALCTPKM RHFKDICLLR 360
  361 EINKALCGFL NCSKAWEHQN IFMDEGDNEI QLVRNGRDSG LLRTETTASH RTPLNDVEMN 420
  421 REKPANNLIR DFYVEGVDNE DHEDDGVATG NWGCGVFGGD PELKATIQWL AASQTRRPFI 480
  481 SYYTFGVEAL RNLDQVTKWI LSHKWTVGDL WNMMLEYSAQ RLYKQTSVGF FSWLLPSLAT 540
  541 TNKAIQPP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] MSA 1.053969 View MSA. No confident structure predictions are available.
    2 View Details [172..302] MSA 1.061956 View MSA. No confident structure predictions are available.
    3 View Details [303..440] MSA 1.066967 View MSA. No confident structure predictions are available.
    4 View Details [441..548] MSA 9.042992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle