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Protein Overview: gi|15982895, gi|...

General Information:
Name(s) found: gi|4586038 [NCBI NR]
gi|25296018 [NCBI NR]
gi|22137258 [NCBI NR]
gi|21554404 [NCBI NR]
gi|15982895 [NCBI NR]
gi|15225377 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|4586038|gb|AAD25656.1| putative heat shock protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G84590 probable heat shock protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22137258|gb|AAM91474.1| At2g20560/T13C7.15 [Arabidopsis thaliana] [NCBI NR]
  • gi|21554404|gb|AAM63509.1| putative heat shock protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15982895|gb|AAL09794.1| At2g20560/T13C7.15 [Arabidopsis thaliana] [NCBI NR]
  • gi|15225377|ref|NP_179646.1| DNAJ heat shock family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP  60
   61 QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF NPRNADDIFA EFFGFSSPFG 120
  121 GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK 180
  181 KMRISREIAD VSGKTMQVEE ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK 240
  241 PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM 300
  301 PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 20.154902 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    2 View Details [90..153] PSI-BLAST 7.221849 Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
    3 View Details [154..337] PSI-BLAST 36.154902 No description for 2q2gA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.68378349552567 bayes_pls_golite062009
  • binding
    		•  2.57553791613838 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.471010639386954 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle