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Protein Overview: PLP4_ARATH

General Information:
Name(s) found: PLP4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15239919|ref|NP_199172.1| patatin, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|10178198|dbj|BAB11622.1| patatin-like protein [Arabidopsis thaliana] [NCBI NR]
  • Patatin-like protein 4 OS=Arabidopsis thaliana GN=PLP4 PE=3 SV=1 [Swiss-Prot]
  • (Q9FIY1) Patatin-like protein [athaliana3702.FASTAC.txt]
  • patatin-like protein [Arabidopsis thaliana]gi|15239919|ref|NP_199172.1| patatin, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Patatin [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | patatin, putative | chr5:17526595-17528704 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • nutrient reservoir [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • patatin-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | chr5:17509368-17511477 REVERSE LENGTH=401 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Acyl transferase/acyl hydrolase/lysophospholipase-like protein OS=Arabidopsis thaliana GN=At5g43590 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: lipid metabolic process [IEA]
    metabolic process [IEA]
    Molecular Function: nutrient reservoir activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNNKPPKY GNLVTILSLD GGGVRGIIGG VILANLEKHL QEIDNDESVR LADYFDVIAG  60
   61 TSTGGLMTAM LTAPNDSGRP LYAAKDIVPF YLEESPKIFY GSKWWDPSAL WALFRPKYNG 120
  121 EYLHTRLGEI LGETKLDQTL TNVVIPTFDI KKLQPTIFSS YHASVDPSLN AKLSDICIGT 180
  181 SAAPFYLPPY KFPENDKMRT FNLIDGGVTA NDPTLVGMTA MSRKSIIKHP DMDGFKPLEY 240
  241 EKYIVISIGT GSAKREEYYS AVEAAKWGFE NWAYNWKHKT TPILDIIFES SRDMVQYHTS 300
  301 VLFQALESED NYLRIDADTL KKDEVFMDDS ETLNLENLKN IGEKLLDTNV MRMNLDTYTY 360
  361 EPIPKTVNND QELKRFAKIL SDEKKLRNKT FKTMIDDSSN S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..401] PSI-BLAST 57.221849 Patatin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.28532118625727 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle