YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|6910576, gi|1...

General Information:
Name(s) found: gi|6910576 [NCBI NR]
gi|58652118 [NCBI NR]
gi|25315951 [NCBI NR]
gi|18087593 [NCBI NR]
gi|15223364 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|6910576|gb|AAF31281.1|AC006424_10 CDS [Arabidopsis thaliana] [NCBI NR]
  • gi|58652118|gb|AAW80884.1| At1g33030 [Arabidopsis thaliana] [NCBI NR]
  • pir||H86454 CDS protein F9L11.18 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18087593|gb|AAL58927.1|AF462839_1 At1g33030/F9L11_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|15223364|ref|NP_174579.1| O-methyltransferase family 2 protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9MAP0) CDS (At1g33030/F9L11_18) [athaliana3702.FASTAC.txt]
  • At1g33030/F9L11_18 [Arabidopsis thaliana]gi|6910576|gb|AAF31281.1| CDS [Arabidopsis thaliana]gi|15223364|ref|NP_174579.1| O-methyltransferase family 2 protein [Arabidopsis thaliana]gi|25315951|pir||H86454 CDS protein F9L11.18 [imported] - Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 O-methyltransferase family 2 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | O-methyltransferase family 2 protein | chr1:11964865-11966192 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • O-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g33030 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CDS [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g33030/F9L11_18 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | O-methyltransferase family protein | chr1:11964885-11966212 REVERSE LENGTH=352 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g33030 OS=Arabidopsis thaliana GN=F9L11.18 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TAS]
    Biological Process: lignin biosynthetic process [ISS]
    Molecular Function: O-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS  60
   61 SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF TKNQNGGGSL APMVNLFQDK 120
  121 VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN 180
  181 YNGFDGVKSL VDVGGGDGSL LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF 240
  241 TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL 300
  301 FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 78.30103 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transcription factor activity
    		•  1.15674263968928 bayes_pls_golite062009
  • transferase activity
    		•  1.07321114919891 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.612108481676679 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.606225212585352 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.14147363365106 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle