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Protein Overview: gi|15220265, gi|...

General Information:
Name(s) found: gi|67633364 [NCBI NR]
gi|25402640 [NCBI NR]
gi|1931643 [NCBI NR]
gi|15220265 [NCBI NR]
Description(s) found:
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  • gi|67633364|gb|AAY78607.1| DNAJ chaperone C-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||C86244 DnaJ homolog, 47062-48761 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|1931643|gb|AAB65478.1| DnaJ isolog; 47062-48761 [Arabidopsis thaliana] [NCBI NR]
  • gi|15220265|ref|NP_172571.1| DNAJ chaperone C-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (O04087) DnaJ isolog, 47062-48761 [athaliana3702.FASTAC.txt]
  • DnaJ homolog, 47062-48761 [imported] - Arabidopsis thalianagi|1931643|gb|AAB65478.1| DnaJ isolog; 47062-48761 [Arabidopsis thaliana]gi|15220265|ref|NP_172571.1| DNAJ chaperone C-terminal domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ chaperone C-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ chaperone C-terminal domain-containing protein | chr1:3679225-3680924 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNAJ chaperone C-terminal domain-containing protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DnaJ isolog; 47062-48761 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | HSP40/DnaJ peptide-binding protein | chr1:3679225-3680924 REVERSE LENGTH=438 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • DNAJ chaperone C-terminal domain-containing protein OS=Arabidopsis thaliana GN=T19D16.7 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE  60
   61 DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ ARPTYLSSSA SSNRRSAFSR 120
  121 STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS 180
  181 NSPINGVKQS SPSSISKSAS KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR 240
  241 STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV 300
  301 NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL 360
  361 TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK EEGKRGDLRI TFLVNFPEKL 420
  421 SEEQRSMAYE VLKDCSWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 19.522879 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [193..438] PSI-BLAST 43.522879 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle