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Protein Overview: gi|15219878, gi|...

General Information:
Name(s) found: gi|6587847 [NCBI NR]
gi|25344988 [NCBI NR]
gi|15219878 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6587847|gb|AAF18536.1|AC006551_22 Putative phospho-2-dehydro-3-deoxyheptonate aldolase 1 precursor [Arabidopsis thaliana] [NCBI NR]
  • pir||B86357 probable phospho-2-dehydro-3-deoxyheptonate aldolase 1 precursor - Arabidopsis thaliana [NCBI NR]
  • gi|15219878|ref|NP_173657.1| 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: aromatic amino acid family biosynthetic process [TAS]
    Molecular Function: 3-deoxy-7-phosphoheptulonate synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA  60
   61 TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV LETIEAFPPI VFAGEARLLE 120
  121 ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA 180
  181 GQFAKPRSDS FEEKDGVKLP SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA 240
  241 FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF 300
  301 WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK 360
  361 VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK LPHLIREVRR AGQIVTWVSD 420
  421 PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT 480
  481 VTFDDLGSRY HTHCDPRLNA SQSLELSFII AERLRKRRIK SQKAFAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..527] PSI-BLAST 1000.0 The Structure of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from Mycobacterium tuberculosis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.96394105633886 bayes_pls_golite062009
  • lyase activity
    		•  1.40463692440932 bayes_pls_golite062009
  • dihydrodipicolinate synthase activity
    		•  1.2687335039487 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.550191215286759 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.21317671520101 bayes_pls_golite062009
  • 3-deoxy-8-phosphooctulonate synthase activity
    		•  0.11229304382048 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.0228214205561801 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle