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Protein Overview: gi|3695404, gi|7...

General Information:
Name(s) found: gi|7484938 [NCBI NR]
gi|7267709 [NCBI NR]
gi|4538977 [NCBI NR]
gi|3695404 [NCBI NR]
gi|20466053 [NCBI NR]
gi|17529216 [NCBI NR]
gi|15234951 [NCBI NR]
Description(s) found:
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  • pir||T01980 dnaJ protein homolog T9A4.1 - Arabidopsis thaliana [NCBI NR]
  • gi|7267709|emb|CAB78136.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4538977|emb|CAB39765.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3695404|gb|AAC62804.1| contains similarity to DnaJ domains (Pfam: PF00226, E=5.8e-13) [Arabidopsis thaliana] [NCBI NR]
  • gi|20466053|gb|AAM20361.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529216|gb|AAL38835.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234951|ref|NP_192751.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (O82623) T9A4.1 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|17529216|gb|AAL38835.1| unknown protein [Arabidopsis thaliana]gi|4538977|emb|CAB39765.1| putative protein [Arabidopsis thaliana]gi|7267709|emb|CAB78136.1| putative protein [Arabidopsis thaliana]gi|3695404|gb|AA [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr4:6320955-6321479 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to DnaJ domains (Pfam: PF00226, E=5.8e-13) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr4:6320959-6321483 REVERSE LENGTH=174 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis thaliana GN=T9A4.1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [ISS]
    Molecular Function: heat shock protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVGENCVHE TYYEILSVKE DASYEEIRNS YRSAILHSHP DKLNNTSRSS SDDEKFLKIQ  60
   61 KAWEVLSDAE LRVVYDNDLR SSRHDGITAD EISIEDMSVE ITGDVIDLFY QCRCGDYFCV 120
  121 DSSELGTMGF ALLRDGDFVY VKRLGAFVAS VVLPCGSCSL KTRVWVDSDM KIPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 22.39794 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  1.59319415069732 bayes_pls_golite062009
  • binding
    		•  1.39865916271528 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.26936882742456 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.0438718605428136 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle