YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|9759130, gi|1...

General Information:
Name(s) found: gi|9759130 [NCBI NR]
gi|15237359 [NCBI NR]
gi|107738251 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|9759130|dbj|BAB09615.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15237359|ref|NP_197152.1| tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|107738251|gb|ABF83668.1| At5g16480 [Arabidopsis thaliana] [NCBI NR]
  • (Q9FFD7) Similarity to tyrosine phosphatase [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15237359|ref|NP_197152.1| tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Tyrosine specific protein phosphatase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | tyrosine specific protein phosphatase family protein | chr5:5381337-5382621 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • phosphoprotein phosphatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g16480 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr5:5381334-5382618 REVERSE LENGTH=204 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g16480 OS=Arabidopsis thaliana GN=At5g16480 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: dephosphorylation [IEA]
    Molecular Function: phosphoprotein phosphatase activity [ISS]
    protein tyrosine phosphatase activity [IEA]
    phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLIVDDDND GEVLIPPPNF SMVEDEIYRS GFPELENFGF LSTLNLRSII YLCPEPYPED  60
   61 NLKSLASNNI KLFQFGIEGK TDPPTPMPKD TVLSALRVLV DVRNHPILIH CKRGKHRTGC 120
  121 LVGCLRKVQN WCLSSVLEEY QKCAGLKWRQ RDLRFIEDFD VLRLKQCLYS IIYQYNGYGL 180
  181 KRRKLLYQEE NVVQEQQKPQ ATKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] PSI-BLAST 34.154902 X-ray structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana gene AT1G05000

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.94343241290871 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  1.63395364913824 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.18733644522437 bayes_pls_golite062009
  • phosphatase activity
    		•  1.13967129037768 bayes_pls_golite062009
  • protein tyrosine phosphatase activity
    		•  1.10948014643251 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  1.07930079815389 bayes_pls_golite062009
  • catalytic activity
    		•  1.06283028154109 bayes_pls_golite062009
  • protein binding
    		•  0.874377197791589 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.766259791679226 bayes_pls_golite062009
  • DNA binding
    		•  0.744259483210066 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle