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Protein Overview: gi|7486467, gi|1...

General Information:
Name(s) found: gi|7486467 [NCBI NR]
gi|3386622 [NCBI NR]
gi|22136132 [NCBI NR]
gi|18406875 [NCBI NR]
gi|17473624 [NCBI NR]
Description(s) found:
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  • pir||T02474 hypothetical protein At2g45730 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3386622|gb|AAC28552.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22136132|gb|AAM91144.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18406875|ref|NP_566054.1| eukaryotic initiation factor 3 gamma subunit family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17473624|gb|AAL38275.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (O80846) At2g45730 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|3386622|gb|AAC28552.1| expressed protein [Arabidopsis thaliana]gi|17473624|gb|AAL38275.1| unknown protein [Arabidopsis thaliana]gi|7486467|pir||T02474 hypothetical protein At2g45730 [imported] - Arabidopsis thal [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic initiation factor 3 gamma subunit family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic initiation factor 3 gamma subunit family protein | chr2:18843593-18846197 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Expressed protein OS=Arabidopsis thaliana GN=At2g45730/F4I18.29 PE=2 SV=1 [ARATH-contam.fasta]
  • Eukaryotic initiation factor 3 gamma subunit family protein OS=Arabidopsis thaliana GN=At2g45730 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of translational initiation [IEA][ISS]
    translational initiation [IEA]
    Molecular Function: translation initiation factor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNKDQTVM SEDKKPQDPN PRFACEGCSV LLDINDGDRL VFARLSSGAI LKIGNKNYSL  60
   61 KPLIGAPFGS LFQVETGEDG SFLSRILPIK QESNSNNVMD DSRDNREIVD NNEAQNLTGE 120
  121 EIEAMRREGA KGDEIIEALI ANSKTFDKKF QLSQEKYKLK KQKKYAPKLL LRRPFARSIC 180
  181 EAYFKKYPAR IGFLRVDALS LLLTMANVTA YSDVLVVDMV GGLVTGAVAE RLGGTGYVCN 240
  241 TYKGSSPYPV EMVRMFNFSD KVLKRIVQSS INELSSAKTA STEGNNQQEG VCKAENNINE 300
  301 TATSDVMVEE ISVTTEAGVV DIVVPESKII KAAKAGAKAS KETIEMWQEN GFSSLIMAAQ 360
  361 DQDPWIVAKD VLPLLSYSAP FAIYHQYLQP LATCMHKLQQ GKMAINLQIT EPWLREYQVL 420
  421 PSRSHPHMQM SSFGGYVLSG IRISTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] MSA 2.042976 View MSA. No confident structure predictions are available.
    2 View Details [236..330] deduced N/A No confident structure predictions are available.
    3 View Details [331..446] PSI-BLAST 32.69897 Probable methyltransferase Rv2118c


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle