YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RBP1B_ARATH

General Information:
Name(s) found: RBP1B_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular transport [IEA]
    protein import into nucleus, translocation [ISS]
    Molecular Function: Ran GTPase binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISNEPER ENRDEEETGA NEDEDTGAQV APIVRLEEVA VTTGEEDEDT ILDLKSKLYR  60
   61 FDKDGSQWKE RGAGTVKFLK HRVSGKIRLV MRQSKTLKIC ANHLVGSGMS VQEHAGNDKS 120
  121 CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK 180
  181 LTVEEKESEK KPVEKAEENK KSEAVEEKKT EESVPSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 39.09691 Ran-binding protein 1, Ranbp1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle