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Protein Overview: PAHX_ARATH

General Information:
Name(s) found: PAHX_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21436043|gb|AAM51599.1| At2g01490/F2I9.11 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197400|gb|AAC67325.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18379234|ref|NP_565262.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16323212|gb|AAL15340.1| At2g01490/F2I9.11 [Arabidopsis thaliana] [NCBI NR]
  • Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana GN=PAHX PE=2 SV=2 [Swiss-Prot]
  • (Q9ZVF6) Expressed protein (At2g01490/F2I9.11) [athaliana3702.FASTAC.txt]
  • At2g01490/F2I9.11 [Arabidopsis thaliana]gi|20197400|gb|AAC67325.2| expressed protein [Arabidopsis thaliana]gi|16323212|gb|AAL15340.1| At2g01490/F2I9.11 [Arabidopsis thaliana]gi|18379234|ref|NP_565262.1| phytanoyl-CoA dioxygenase (PhyH) family protein [ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phytanoyl-CoA dioxygenase (PhyH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phytanoyl-CoA dioxygenase (PhyH) family protein | chr2:221315-223186 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phytanoyl-CoA dioxygenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g01490/F2I9.11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | phytanoyl-CoA dioxygenase (PhyH) family protein | chr2:221316-223187 FORWARD LENGTH=283 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g01490/F2I9.11 OS=Arabidopsis thaliana GN=At2g01490 PE=2 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: phytanoyl-CoA dioxygenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGITGSLTPD QLDFFHSQGY LVIESFASED EIRGLRKRMD ELLNQFDCSV SSIFSTKNQK  60
   61 HTTDNYFFES AEKISFFFEE KAFGDDGKLK QPKQLSINKV GHALHELDPL YKDFTYSSKF 120
  121 SSLASSLGYR RPVVMQSMYI FKQPGIGGEV VPHQDNSFVY TDPQSCTGLW IALEDSTLVN 180
  181 GCLWAIPGSH KNGLVRRFIR GDNGITFDQP SPSYEQKDFV SIEMKAGSLI AIHGDLIHQS 240
  241 FENLSSKSRH AYSLHVVESD GCKWAKDNWI QRAKMPEPLY VLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 67.69897 No description for 2opwA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle