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Protein Overview: IRX10_ARATH

General Information:
Name(s) found: IRX10_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 412 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    endomembrane system [IEA]
    Biological Process: glucuronoxylan biosynthetic process [IMP]
    secondary cell wall biogenesis [IMP]
    Molecular Function: catalytic activity [ISS]
    glucuronoxylan glucuronosyltransferase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHSCLSAI LLFLFFSASS AKQNVRTERI SGSAGDVLED DPVGKLKVYV YELPSKYNKK  60
   61 LLQKDPRCLT HMFAAEIFMH RFLLSSPVRT RNPDEADWFY TPIYPTCDLT PTGLPLPFKS 120
  121 PRMMRSSIQL ISSNWPYWNR TEGADHFFVV PHDFGACFHY QEEKAIERGI LPLLQRATLV 180
  181 QTFGQRNHVC LDEGSITIPP FAPPQKMQAH FIPPDIPRSI FVYFRGLFYD VNNDPEGGYY 240
  241 ARGARAAVWE NFKNNPLFDI STDHPTTYYE DMQRAIFCLC PLGWAPWSPR LVEAVVFGCI 300
  301 PVIIADDIVL PFADAIPWEE IGVFVAEKDV PELDTILTSI PTEVILRKQR LLANPSMKRA 360
  361 MLFPQPAQPG DAFHQILNGL ARKLPHDKSI YLKTGEKALN WTAGPVADLK PW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] MSA 4.105985 View MSA. No confident structure predictions are available.
    2 View Details [154..412] FFAS03 1.02 No description for 2nzwA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.89798084233658 bayes_pls_golite062009
  • transferase activity
    		•  0.758148981665123 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.398470504821598 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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