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Protein Overview: gi|15227436, gi|...

General Information:
Name(s) found: gi|3608134 [NCBI NR]
gi|25408387 [NCBI NR]
gi|15227436 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|3608134|gb|AAC36167.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • pir||H84769 probable DnaJ protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227436|ref|NP_181097.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [ISS]
    Molecular Function: heat shock protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS  60
   61 SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP DKNPYVGCEE GFKLLNEAFR 120
  121 VFSDKGEMVS GGSGGDETST FSAVCSGCRS VHKFDRKYLG QNLMCPTCKN SFEAKEVEKE 180
  181 EEGRENGACT SKIITYSRRK RPVDSDGESL IKEVETGEMS QEAAEAINVF EGSDEEDEGM 240
  241 MTLAEMQAVI KRNKSKVNSK ITEKDSSGEE NMGRETQKRS LADASMTETL REMSTNAVNN 300
  301 KQEVLKNRKN IKKKKMANHK DLTEIVDLEY VPRVDRKRDR GKLSQEMYME DEDFELYDFD 360
  361 KDRMPRSFKK GQIWAIYDGG DDKMPRSYCL VSEVVSLNPF KVWISWLDFE SEKLISWMKI 420
  421 SSSHMPCGRF RVSEKALIEQ VKPFSHLVNC ERAAREIYQI YPKKGSVWAV YSETNPGLQR 480
  481 RKTRRYEIVV CLTMYTDAYG LSVAYLEKVN DYSNLFKRRD YGYNAVRWVE KEDVAALLSH 540
  541 QIPAKKLPED ESGADLKESW VLDLASVPPD LVSAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] MSA 1.270996 View MSA. Confident ab initio structure predictions are available.
    2 View Details [66..167] PSI-BLAST 22.69897 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [168..357] PSI-BLAST 21.0 The crystal structure of Hsp40 Ydj1
    4 View Details [358..575] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle