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Protein Overview: gi|10177264, gi|...

General Information:
Name(s) found: gi|15239526 [NCBI NR]
gi|10177264 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15239526|ref|NP_200213.1| zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|10177264|dbj|BAB10732.1| CHP-rich zinc finger protein-like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 556 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTDHEEVT LPFHHHPLSC GTFESYTFRS ILSIPKLRNG IYNCYHCKEC SLTFHKEWAD  60
   61 SFFSQQFICN HVLKIFRRAK TPLVDSTDDH FCHFCRSKLK LKHFRCTICN ISVGRECVKD 120
  121 PPPLTIYQPK HHKHSLTLLL RLVTFTCNAC GVEDDRNPYV CLECNLMVHK YCIEKLPRVI 180
  181 SINRHDHRIN HTFHLGQGEG DKECGVCRKK INWAYGGYEC SRCPSYAVHS RCATRREVWD 240
  241 GLELEDVPEE EEEIEDPFKV VNEKGDIVHF CHEEHVLRLD ENYVTDNVNM RCRCCVLAID 300
  301 GDPCYRCLEC DFILHEKCAN LPRKMRHLLH NHKLSLEVSF TRFRRSDNFF YTCIACQTHT 360
  361 DGFIYACHDG LCRYLVKSIK YDVRCSSVSE PFHHDLHQHP LYFTLQSSRQ CQACGTKIDH 420
  421 DPLSCTVCDD YSLCMRCTTL PRKVKHRCDD HFLSLCQGSS VNDSGDLWCD ICETKTDPSV 480
  481 CYYTCDECGL SLHIDCVLGD LYYLKLGIPE PDVEICPNNE ATRPLCSGCK VRCKNPFFIR 540
  541 STEEEPASHA CSIDCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 9.69897 Crystal Structure of the Human Beta2-Chimaerin
    2 View Details [128..447] FFAS03 1.07 Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
    3 View Details [448..556] PSI-BLAST 4.0 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle