YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: IPCS1_ARATH

General Information:
Name(s) found: IPCS1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|7630022|emb|CAB88364.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22655034|gb|AAM98108.1| At3g54020/F5K20_320 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232394|ref|NP_190970.1| phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T45942 hypothetical protein F5K20.320 - Arabidopsis thaliana [NCBI NR]
  • Phosphatidylinositol:ceramide inositolphosphotransferase 1 OS=Arabidopsis thaliana GN=IPCS1 PE=2 SV=1 [Swiss-Prot]
  • (Q9M325) Hypothetical protein (At3g54020/F5K20_320) [athaliana3702.FASTAC.txt]
  • At3g54020/F5K20_320 [Arabidopsis thaliana]gi|7630022|emb|CAB88364.1| putative protein [Arabidopsis thaliana]gi|11290578|pir||T45942 hypothetical protein F5K20.320 - Arabidopsis thalianagi|15232394|ref|NP_190970.1| phosphatidic acid phosphatase-related [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phosphatidic acid phosphatase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phosphatidic acid phosphatase-related / PAP2-related | chr3:20017076-20018998 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At3g54020/F5K20_320 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AtIPCS1 | Arabidopsis Inositol phosphorylceramide synthase 1 | chr3:20006098-20008020 FORWARD LENGTH=305 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: sphingolipid biosynthetic process [IDA]
    Molecular Function: inositol phosphoceramide synthase activity [IDA][IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT  60
   61 LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI VKSKKIYTVL IWCRVLAFLV 120
  121 ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS 180
  181 HMIFTLVFVR TYQKYGSKRF IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF 240
  241 LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN 300
  301 ATNGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..57] MSA 1.045993 View MSA. No confident structure predictions are available.
    2 View Details [58..305] FFAS03 1.51 No description for 2a96A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle