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Protein Overview: GGPP9_ARATH

General Information:
Name(s) found: GGPP9_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] [NCBI NR]
  • Geranylgeranyl pyrophosphate synthase 9, chloroplastic OS=Arabidopsis thaliana GN=GGPPS9 PE=1 SV=1 [Swiss-Prot]
  • (Q9LUE1) Geranylgeranyl pyrophosphate synthase [athaliana3702.FASTAC.txt]
  • At3g14530 [Arabidopsis thaliana]gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, p [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Geranylgeranyl pyrophosphate synthase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative | chr3:4879300-4880455 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • farnesyltranstransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g14530 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Terpenoid synthases superfamily protein | chr3:4879293-4880448 REVERSE LENGTH=360 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: isoprenoid biosynthetic process [IEA][ISS]
    Molecular Function: farnesyltranstransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTVHLSSS SLFSQSRGRR DNSISSVKSL RKRTVLSLSS ALTSQDAGHM IQPEGKSNDN  60
   61 NSAFDFKLYM IRKAESVNAA LDVSVPLLKP LTIQEAVRYS LLAGGKRVRP LLCIAACELV 120
  121 GGDEATAMSA ACAVEMIHTS SLIHDDLPCM DNADLRRGKP TNHKVYGEDM AVLAGDALLA 180
  181 LAFEHMTVVS SGLVAPEKMI RAVVELARAI GTTGLVAGQM IDLASERLNP DKVGLEHLEF 240
  241 IHLHKTAALL EAAAVLGVIM GGGTEQEIEK LRKYARCIGL LFQVVDDILD VTKSTEELGK 300
  301 TAGKDVMAGK LTYPRLIGLE GSREVAEKLR REAEEQLLGF DPSKAAPLVA LASYIACRHN 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 80.0 No description for 2j1pA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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